Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKAVHHIAIIVSDYEKSKDFYVNKLGFEIIRENHRP------------ERHDYKLD---------LRCGDIELEIFGNRLDDPEYETPPQRIGRPNWPREACGLRHLAFYVPDVEAYKIELENLGI-FVEPIRYDDYTGKKMTFFFDPDGLPLELHE
2ZA0 Chain:A ((32-174))
-----LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDD---ETQSYHNGNSD-PR---GFGHIGIAVPDVYSACKRFEELGVKFVK--KPDDGKMKGLAFIQDPDGYWIEILN
General information:
TITO was launched using:
RESULT:
Template:
2ZA0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38614 for 734 contacts (-52.6/contact) +
2D Compatibility (PS) -13030 + (NN) -4891 + (LL) 1236
1D Compatibility (HY) -4400 + (ID) 2050
Total energy: -61749.0 ( -84.13 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_2ZA0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZA0-query.scw
PDB file :
Tito_Scwrl_2ZA0.pdb
: