Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIKKLLGLTTTVVISALILGACGQSKNEDAKVVRVGTMVKSKTEKARWDKIEELVKKKGVKLKFTEFTDYTQPNKALESDEIDINAFQHYNYLNNWNKANKTNLVSVAETYFTSFRLYSGTKNGKGKYQTVSEIPNKATITIPNDAVNESRSLYLLQSAGLLKLKVSGD-TLATMSDVVSNPKSLDL-KEVDAAQTARSLDSTDAA--VINNDFVTEAGINP-KSAIFIEPKSKNAKQWYNLLVAQKGWQDKSKAKAIKEVVKAYHTDAVKKVIEKTSQGLDQPVW |
| 4EF2 Chain:A ((2-244)) | -----------------------------DDSVLKVGASPVPHAE--ILEHVKPLLEKEGVKLEVTTYTDYVLPNKALESGDIDANYFQHVPFFNEAVKENDYDFVNAGAIHLEPVGLYS------KKYKSLQEIPDGSTIYVSSSVSDWPRVLTILEDAGLITLKEGVDRTTATFDDIDKNTKKLKFNHESDPAIMTTLYDNEEGAAVLINSNFAVDQGLNPKKDAIALE---KESSPYANIIAVRK--EDENN-ENVKKLVKVLRSKEVQDWITKKWNGAIVPVM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46182 for 1953 contacts (-23.6/contact) +
2D Compatibility (PS) -25299 + (NN) -9504 + (LL) 2400
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -98885.0 ( -50.63 by residue)
QMean score : 0.465
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