Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISSNYSYPLDPSWNTEDITKVLRFLNQVEHAYENSVKVDDLLDSYKEFKKVVKSKAQEKQIDREFQRTSGYSTYQAVKAAQQQAKGFISLGR
1WPB Chain:A ((67-94))
---------------CRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEARYLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEK
General information:
TITO was launched using:
RESULT:
Template:
1WPB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2923 for 102 contacts (-28.7/contact) +
2D Compatibility (PS) -3006 + (NN) -1385 + (LL) 300
1D Compatibility (HY) -2000 + (ID) 100
Total energy: -9114.0 ( -89.35 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_1WPB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WPB-query.scw
PDB file :
Tito_Scwrl_1WPB.pdb
: