Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVILP----PNCKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQ-------DSQCIDDI-----NIYEATKHAMIDAVSHLSVAPEHLLIDAM--------VLDLSIPQTKI-IKGDANSLS--IAAASIVAKVTRDKIM----------SDYDSTYPGYAFSKNAGYGTKEHLEGLQKYGITPIHRKSFEPIKSML |
| 3PUF Chain:A ((30-245)) | -----------------------------------------------------------------------VLGVDEAGRGPVLGPMVYAICYCPLPRLADLEALKVADSKTLLESERERLFAKMEDTDF-VGWALDVLSPNLISTSMLGRVKYNLNSLSHDTATGLIQYALDQGVNVTQVFVDTVGMPETYQARLQQSFPGIEVTVKAKADALYPVVSAASICAKVARDQAVKKWQFVEKLQTDYGSGYPNDPKTKA---WLKEHVEPV--FGFPQFVRFSWRTAQTIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73478 for 1282 contacts (-57.3/contact) +
2D Compatibility (PS) -18730 + (NN) -7912 + (LL) 7536
1D Compatibility (HY) -14800 + (ID) 2550
Total energy: -109934.0 ( -85.75 by residue)
QMean score : 0.289
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