Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MCAFFKTDTLKSCAIDQNAGSKKSATLQIARRVKKGIGDFPKTEKGNSLIVGYPQIGLSPFLFSHVSGHVLRLPENKSTELWEDCQILN-KGHCVEMRK
1KP6 Chain:A ((1-79))
NNAFCAGFGLSCKWECWCTAH-GTGN----ELRYATAAGCGDH-----------------LSKSYYDARAGHCL-FSDDLRNQFYSHCSSLNNNMSCRSLSK
General information:
TITO was launched using:
RESULT:
Template:
1KP6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27957 for 530 contacts (-52.7/contact) +
2D Compatibility (PS) -8117 + (NN) -2624 + (LL) 956
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -43042.0 ( -81.21 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_1KP6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KP6-query.scw
PDB file :
Tito_Scwrl_1KP6.pdb
: