Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSGKKAIVFSLFGIAFGYFCHRMILLYDSLPNQPPIEKIAYLFSDGQKVLMQQPWEFGFTKRSLLAFVSGFLSMCLVYLYVSTGQKIYREGAEYGSARFGTRKEKRFFYSKNPFNDTILAQDVRLTLLEKKSPKFDRNKNLIVIGGSGAGKTFRF--VKANLIQLNCSNIVVDPKDHLAEKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDLNRTLTVYFNNTKGTGSRSDPFWDEASMTLVRAIASYLVDFYNPPGSAKEEAEQRRKRGCYPAFSEIGKLIKLLSKGDNQDKSVLEVMFEEYAKKYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVIDVTK--RDTLDLKTWGTQ--KTMVYLVIPDN-DTTFRFLSALFFSTVFSTLTRQADVDFKGKLPIHVRSYLDEFPNIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLLYLGGN--DEETFKFMSALLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEVGRMRRDECLVRIAGVPVFRSKKYLPTRHKNWKLLAEKETDDRWCHYHINPLSHDEPLDLFDHKMRDLTAETTLH |
| 1E9R Chain:A ((17-429)) | ---------------------------------------------------------------------------------------------FLRGTRIVSGGKLKRMTREKA-KQ--------VTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGR------DKDIILNPYDQ-RTKGWSFFNEIRNDYDWQRYALSVVPRG---KTDEAEEWASYGRLLLRETAKKLALIG------------------TPSMRELFHWTTIAT---------FDDLRGFLEGT-----LAESLFA-----GSNEASKALTSARF----VLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPE-----EPKRRLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVK-EAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERD-------------RALERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGT----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129691 for 3287 contacts (-39.5/contact) +
2D Compatibility (PS) -41489 + (NN) -12190 + (LL) 11744
1D Compatibility (HY) -14000 + (ID) 3000
Total energy: -188626.0 ( -57.39 by residue)
QMean score : 0.398
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