Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSQKVILTNMCLIEDNKGRIVMQIRDPKRYSWSGAALPGGHIEEGESLYDALVREVHEETGLTISNPKLVGMK---HWYTDEGIRYLVFLYKTYDFSGELQSSDEGDVVWIERSQLDKIELAYDMLNLLRVFDEDDISEMFYSKRLEDGFIRKFY
3R03 Chain:A ((6-134))
-----PILLVTAAALIDPDGRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSY--DTFHLLMPLYACRSWRGRATAREGQTLAWVRAERLREYPMPPADLPLIPILQDWL-------------------
General information:
TITO was launched using:
RESULT:
Template:
3R03.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78900 for 923 contacts (-85.5/contact) +
2D Compatibility (PS) -13576 + (NN) -5133 + (LL) 1576
1D Compatibility (HY) -6800 + (ID) 1550
Total energy: -104383.0 ( -113.09 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3R03.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R03-query.scw
PDB file :
Tito_Scwrl_3R03.pdb
: