Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFTIGKYSS--------GVSQKVQQFRQNVVMLVIAIIQGLAIAISFQYH-NG------FSLTKLLLATMILVTGAYIISWIGNLNAEYGFG-GMTILVVVGMLVGQFNNIPLIFELFQDGYQLAIILFLLWTLVAMY-LMITFERSEYRIPVMRTSIH----NRLVDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSYNDYFSLSSIQGVVIYMILMLVLSVAFTFVNIDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
3DIN Chain:C ((8-423)) | -----AFKIPELRDRIIFTFLALIVFRMGIYIPVPGLN-----------LSFYDVFTGGALSRFSVFTMSVTPYITASIILQLLA-SVMPSLKEMLREGEEGRKKFAKYTRRLTLLIGGFQAFFVSFSLARSNPDMVAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGNGISILIFAGIVARYPSYIRQAYLGG--LNLLE-WIFLIAVALITIFGIILVQQAERRITIQYARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNN-----ETL---KNLFRAGGFLYLLIYGLLVFFFTYFYSVVIFDPREISENIRKYGGYIPGLRPGRSTEQYLHRVLNRVTFIGAVFLVVIALLPYLVQGAIKV--NVWIGGTSALIAVGVALDIIQQMETHMVMRHYEGFIK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239656 for 2558 contacts (-93.7/contact) +
2D Compatibility (PS) -38167 + (NN) -671 + (LL) 2096
1D Compatibility (HY) -33600 + (ID) 4400
Total energy: -314398.0 ( -122.91 by residue)
QMean score : 0.201
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