Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYTNGNFEAFARPRKPEGVDKKSAYIVGSGLAGLAAAVFLIRDGQMDGQRIHIFEELPLSGGSLDGVKRPDIGFVTRGGREMEN---HFECMWDMYRSIPSLEVPDASYLDEFYWLDKDDPNSSNCRLIHKQGNRLESDGDFTLGTHSKELVKLVME---TEESLGAKTIEEVFSKEFFE-----SNFWTYWATMFA-FEKWHSAIEMRRYAMRFIHHIGGLPDFTSLKFNKYNQYDSMVKPIISYLESHNVDVQFDSKVTNISVDFKNGQKLAKAIHLTVGGEAKTIDLTPDDFVFVTNGSITESTNYGSHDTVAKPNTDLGGSWNLWENLAAQSDEFGHPKVFYKDIPKESWFVSATATIKDPAIEPYIERLTHRDLHDGKVNTGGIVTVTDSNWMMSFAIHRQPHFKEQKENETIVWIYGLYSNVEGNYIKKPIEECTGREITEEWLYHLGVPEMKIHDLSDKQYVSTVPVYMPYITSYFMPRVKGDRPDVIPQGSVNLAFIGNFAESPSRDTVFTTEYSIRTAMEAVYTFLNIERGVPEVFNSAFDIRVLLQSLYYLNDKKSVEDMDLPIPALMRKVGMKKIRGTYLEELLREAHLL |
| 3NRN Chain:A ((1-249)) | ----------------------MRAVVVGAGLGGLLAGAFLARNG----HEIIVLEKSAMIGGRFTNLP--YKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEI-VNSNPKGKILWE-GKI---FH--Y--RESW-----KFLS-------KLLAEIRMNKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALR-------WGGPGLIRGGC-KAVIDELERIIMENKGKILTRKEVVEINIEEK----K---VYTR-D--NEEY---SFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNTIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFPEGEPLLAQVYHIEWPLNEVLVVGDGYRPPGGIEVDGIALGVMKALEKLNLGSFSEWYL-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82758 for 1649 contacts (-50.2/contact) +
2D Compatibility (PS) -24759 + (NN) -5368 + (LL) 10300
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: -107985.0 ( -65.49 by residue)
QMean score : 0.261
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