Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKLTGYEIDMMKAIAKKL-KIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPERLKKYNFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMKIAKQQGAE----PVIYDNVTND---VYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQG----IVMSKKDKSLKTKIDAAIKDMKKDGSLKKISEKYYAGQDLTKEPAGTDKIPVIKVK |
| 4EQ9 Chain:A ((12-242)) | -----------------------------------------VATNGSPRPF-IYEENGELTGYEIEVVRAIFKDSDKYDVKFEKTEWSGVFAGLDADRYNMAVNNLSYTKERAEKYLYAAPIAQNPNVLVVKKDDSS---IKSLDDIGGKSTEVVQATTSAKQLEAYNAEHTDNPTILNYTKADFQQIMVR-LSDGQFDYKIFD----KIGVETVIKNQGLDNLKVIEL---PSDQQPYVYPLLAQGQDELKSFVDKRIKELYKDGTLEKLSKQFFGDTYLPAEADIK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47741 for 1641 contacts (-29.1/contact) +
2D Compatibility (PS) -23982 + (NN) -7825 + (LL) 3388
1D Compatibility (HY) -12800 + (ID) 3550
Total energy: -92510.0 ( -56.37 by residue)
QMean score : 0.385
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