Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKCLTLNTHSWMEVNALKKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPL-KPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVSLHLSWF-EKGFAEEWKRLETTLLE-VETPLLLMGDFNNPTGNQGYE--------------LVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSEDLS--ISSSQVVFEGGEAPVVSDHYGLEITMDF |
| 1VYB Chain:A ((7-238)) | HITILTLNINGLNS---AIKRHRLASWIKSQDPSVCCIQETHLTCRDTH---------------------------RLKIKGWRKIYQA-----NGKQKKAGVAILVSDKTDFKPTKIKRD-K------EGHYIMVKGSIQQEELTILNIYAPNTGA---PRFIKQVLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDTQELNSALHQAD--LIDIYRTLHPKSTEYTFFSA-----PHHTYSKIDHIVGSKALLSKCKRTEII-----TNYLSDHSAIKLELR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113478 for 1745 contacts (-65.0/contact) +
2D Compatibility (PS) -23342 + (NN) -13038 + (LL) 2968
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -156090.0 ( -89.45 by residue)
QMean score : 0.397
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