Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNKVQERRERKIKEAIKAKNWDEVTRLLQQEQSNAERRDRYHNRRIK------DETIASKNAKKSVRYDVIASSDLNPEEALILEELRQAIREAKASLSEIDSKIVEMIAEQGSSYKETARYITEHYKKMSDVTVKSHYCKALKKLAPLLKAYR |
3M46 Chain:A ((562-643)) | --------------------------------EQNARGRYVYLPEEMKFIKFMPDGSISEEVLEKGVHYVDVA---LNEVPLFIRSGKCIPVAEAAECVKDIDTENMQLIGYEGSSYTLYEDDGIHKDYDKKENYRVLTK--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9861 for 371 contacts (26.6/contact) +
2D Compatibility (PS) -7786 + (NN) 1939 + (LL) 4412
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: 2476.0 ( 6.67 by residue)
QMean score : 0.049
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