Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MVKHQQTPAYIAAILYSFIIGLSFLFVKIALQTAEPFDILAHRFTIAFAAATVPILFGWVKLSIRVKDVIDILPLALLYPALFFSFQAFG-----LVYSS--SSEAGIIQAAIPIFTMVFAAYVLKERPTWTQKGFTVLSVAGVMFI---FVMKGVDVESASLKGSLLILLSALSSAMYNTAARKMTQRFKLTE-----------LTYIMSAIGFVVF-------NAIALVRHGAAGTVG----TYFLPFRE----PGFVLAIVYLGVLS--SLVTSFLSNYTLSRIEAFKMSAFNHVSTIVTMIAGFVILNESLAWYHLAGAVCIMIGVVGSNINLEKKTKRPGMPAKK 3J6V Chain:I ((68-396)) ----SYTVDFIKKQIEEFNIGKRHLANMMG---EDP-----ETFTQEDVDRAITYLFPSGLFEKRARPIMK-HPEEIFPKQRAVQWGEDGRPFHFLFYTGKQSYYSLMHEAYGKVLHAEERQDQLRAKGLFSEKSKSKDLIGSRWLIKEELEEMLVEKLSDQDYAQFIRLLERLSALPCDAAEEEFVGRFRRTVTVQSKKHLIEPLQYDEQGMAFSTGQGKRKTANAEAVVYGHGSGKIEINGVDYLLYFPVTQDREQLMFPFHFLDRLGKHDVTCTVSGGGRSSQAGAIRLAMSRALCSFIT--------EDEVEWMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR

General information: TITO was launched using: RESULT: Template: 3J6V.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 1310 -101937 -77.81 -350.30 target 2D structure prediction score : 0.45 Monomeric hydrophicity matching model chain I : 0.66 3D Compatibility (PKB) : -77.81 2D Compatibility (Sec. Struct. Predict.) : 0.45 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.229

(partial model without unconserved sides chains): PDB file : Tito_3J6V.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3J6V-query.scw PDB file : Tito_Scwrl_3J6V.pdb: