Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTNYWIGVV-SEQHVLKGAAGGFAQLCHGKKAPLAK-MK---E-GDWLIYYSPRDAYPDGKLLRSFTAIGKVKSGNIYPYQMA----PNFIPYRLDIDYYPCHKIGFYDIKSKLEFVQETKHLG--FLF--RRGHFEISKKDFLTIAQAMGVNISGMAL
4RCM Chain:A ((16-156))--SRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSI-------NTSGRFCGVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLK-RFL-----IPSNEMKPITHSRDTQEIPYSIGISIINLFKTQDS----


General information:
TITO was launched using:
RESULT:

Template: 4RCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 562 -78677 -139.99 -619.50
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -139.99
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.286

(partial model without unconserved sides chains):
PDB file : Tito_4RCM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RCM-query.scw
PDB file : Tito_Scwrl_4RCM.pdb: