Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMN----MYWFLGALLYFLIGTYIFIR--------------VTRDSQSGSWILLALAAPL--IIAGYPYFYSKKLLSKRR
1W8X Chain:P ((1-116))MDKKKLLYWVGGGLVLILIWLWFRNRPAAQVASNWEGPPYMTYNQPQAGSVTLPVADSITSQLNDYASSLNDYLASQAG


General information:
TITO was launched using:
RESULT:

Template: 1W8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 39 -5521 -141.55 -93.57
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain P : 0.72

3D Compatibility (PKB) : -141.55
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.040

(partial model without unconserved sides chains):
PDB file : Tito_1W8X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W8X-query.scw
PDB file : Tito_Scwrl_1W8X.pdb: