Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASEREQISRKVALIALIANLILMAGKVFFGLVGDSEAVFADGIHSAADVVASIAVLAVIGISNKPPDQDHPFGHGKAEVISEAIVGIILVIVSVYILIEAILSFVKGPSVPQYSALFAALISYVAKEILYRYSIKQGKKWNSKAIIAIAYDHKGDIVASLAAFIGVLLAIIGNSRGWSYLLYADAIASAIVAYLIFKISMELIRPSVDVLMEKSVDPELIEEYKAVIFQCDQVKRIDRIRAREHGHYKLLDVRLSLDHDLTIKQGHDIAREIRNEIKRQFSDVEEVLIHVNPYFEE
1TH5 Chain:A ((189-224))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVKVRLTGPAA--VVRTVRIAVSKKLREKIPSIQIVQL--------


General information:
TITO was launched using:
RESULT:

Template: 1TH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 67 -19007 -283.69 -527.97
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -283.69
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.672

(partial model without unconserved sides chains):
PDB file : Tito_1TH5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TH5-query.scw
PDB file : Tito_Scwrl_1TH5.pdb: