Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKGRGLEILINEKQDGQWLFSVLKTALKASKPVIQDWMSHQQIKVNHESVLNNMIVKKGDRVFIDLQESEASSVIPEYGELDILFEDNHMLIINKPAGIATHPNEDGQTGTLANLIAYHYQINGETCKVRHVHRLDQDTSGAIVFAKHRLAHAILDQQLEKKTLKRTYTAIAEGKLRTKKGTINS---PIGRDRSHPTRRRVSPGGQTAVT-----HFK--VMASNAKERLSLVELELETGRTHQIRVHLASLGHPLTGDSLYGGGSKLLNRQALHANKVQAVHPITDELIVAEAPFPADMKNLCRTYFS
2OML Chain:A ((8-173))--------------------------------------------------------------------------------------NQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIP----V----QGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGK--RTGKIYYVQVEGIPTQ--DALEALRNGVTLND---G--PTLPAGAELVDEPAWLWPRNPPIR-RKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGD-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2OML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 699 -43725 -62.55 -282.09
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -62.55
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.332

(partial model without unconserved sides chains):
PDB file : Tito_2OML.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OML-query.scw
PDB file : Tito_Scwrl_2OML.pdb: