Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPYQRYEELKKKTIKVVQKENYS---IRYITQDEASNDLDEFYKQF--AQHLLEAALERKAE------------------------------------------------------------------------------------------------------------------------
5CXI Chain:A ((18-198))--QRERRKRILDATMAIASKGGYEAVQMRAVADR-ADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTDRSAAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIG


General information:
TITO was launched using:
RESULT:

Template: 5CXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 183 1083 5.92 19.69
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : 5.92
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.645

(partial model without unconserved sides chains):
PDB file : Tito_5CXI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CXI-query.scw
PDB file : Tito_Scwrl_5CXI.pdb: