Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTKTAFMAILFSLITVLSACGAGSQTTGAGQKKVQTITVGTGTQFPNICFIDEKGDLTGYDVELIKELDKRLPHYKFTFKTMEFSNLLVSLGQHKVDIVAHQMEKSKEREKKFLFNKVAYNHFPLKITVLQNNDTIRGIEDLKGKRV-ITSATSNGALVLKKWNEDNGRPFEI-AYEGQGANETANQLKSGRADAT-----------ISTPFAVDFQNKTSTIKEKTVGNVLSNAKVYFMFNKNEQTLSDDIDKALQEIIDDGTLKRLSLKWLGDDYSKEQY
1HSL Chain:A ((4-231))-----------------------------------QKIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRI-NTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAA-DSRLVVAKNSDIQPTVASLKGKRVGVLQGTTQETFGNEHWAP---KGIEIVSYQGQ--DNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPAVKDEKLFGVGTG----MGLRKEDNELREALNKAFAEMRADGTYEKLAKKYF---------


General information:
TITO was launched using:
RESULT:

Template: 1HSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1151 -2984 -2.59 -13.88
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -2.59
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_1HSL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HSL-query.scw
PDB file : Tito_Scwrl_1HSL.pdb: