Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPFGFTPKARHNRGVALRSTYRLDGWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQNTAIIMGGTGSPIPTPSYVNAITTLFIDPVVSNPVVKALVTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQI--NAGNHVTVFGYSQSAVIASLEMQHLISLG-------PNAP--SPSQLN-FILIGNEMNPNGGILARIPGLNVTTLGLPFYGA--TPD-NPYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLAALGGMIEFIAIVVTLADITQQLQSFSI |
| 1G66 Chain:A ((3-193)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------PAIHVFGARETTASPG-YGSSSTVVNG-VLSAYPGSTAEAINYPACGGQSS-CGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMFRAGLSYEVGTCA---AGGF-DQRPAGFSCPSAAKIKSYCDASDPYCCNGSN--------------AATHQGYGSE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64533 for 1577 contacts (-40.9/contact) +
2D Compatibility (PS) -19139 + (NN) -13194 + (LL) 26828
1D Compatibility (HY) 3600 + (ID) 1050
Total energy: -67488.0 ( -42.80 by residue)
QMean score : 0.358
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