Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPP----PSMLTPPIRCRS-VRRALQAV--FTPEELYPLTGVRSLVLNTSVEEGLTILHDAIMVELA-TTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLN-FVLVGNEMNPNGGMLARFPDLTLPTLDLTFYGATPSDTIYPTAIYTLEYDGFADFSRYPLNFISDLNAVAGITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ |
| 3QPA Chain:A ((31-194)) | ----------------------------------------------------------------------------CADVIFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNA-----LPRGTSSAAIREMLGLFQQANTKCPDATLIAGGY-QGAALAAASIEDLDSAI-----RDKIAGTVLFGYTKNLQNRG--RI----------------PNYPADRTKVFCNTGDLVCTGSLI-------------VAAPHLAYGPD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62877 for 1253 contacts (-50.2/contact) +
2D Compatibility (PS) -16692 + (NN) -9065 + (LL) 21216
1D Compatibility (HY) 2400 + (ID) 1050
Total energy: -66068.0 ( -52.73 by residue)
QMean score : 0.349
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