Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKHDVVWVTLWPERPNNKPPPSPRQVPGNPGPTLKVLASHVNAPLSAKPRSQLPLRRAQLSDEVAGHLRAAIMSGALRSGTFIR-LDETAAELGVSVTPVREALLKLRGEGMVGLEPHRGHVVLPLTR-------------------QDIDDIFWLQATIAQELATSATAHITDVEIDELDRINNALAGAIGSGDAKTIASIEFAFHRVFNKASRRIKLAWFLLNAARYMGAGV------RGRPAMGRGRGEQSSA-------ADRRAAPPRHSRRNRAHRLAVHRWGTQADGGPG |
1HW1 Chain:A ((5-230)) | ---------------------------------------------------------AQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKAQEVLAT----ANEV--ADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRY-GHESGEIWHRMQKNL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53012 for 1323 contacts (-40.1/contact) +
2D Compatibility (PS) -20787 + (NN) -6573 + (LL) 1748
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -87324.0 ( -66.00 by residue)
QMean score : 0.422
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