Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQKPVADALTLELEPVVEANMTRHLDTEDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHHRELVEHFILEDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEKYTQVETLVYMAFYERCGAVFCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAADLDVLGADIEAYRDKLQNVADAGIFGKPQLRQLISDRITAWGLAGEPSLKQFVTG
1ZA0 Chain:A ((8-274))
-------DALTLELEPVVEANMTRHLDTEDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDACEILLILKDN---------------DWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRV----------KYTQVETLVYMAFYERCGAVFCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAADLDVLGADIEAYRDKLQNVADAGIFGKPQLRQLISDRITAWGLAGEPSLKQFVT-
General information:
TITO was launched using:
RESULT:
Template:
1ZA0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155863 for 1843 contacts (-84.6/contact) +
2D Compatibility (PS) -25934 + (NN) -13114 + (LL) 3028
1D Compatibility (HY) -35200 + (ID) 12050
Total energy: -239133.0 ( -129.75 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_1ZA0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZA0-query.scw
PDB file :
Tito_Scwrl_1ZA0.pdb
: