Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDHLTACAAVHPGPLVSHLSVMHRFRIYVDIAVVVLVLVLTNLIAHFTTPWASIATVPAAAVGLVILVRSRGLGWAELGLSRQHWKSGLVYALAAVALVVAVISVGVLLPITRPMFMNHHYATISGAVIASMVMIPLQTVIPEELAFRGVLHGALNRAWGFRGVAVAGSVLFGLWHIATSLGLTSSNVGFTRLFGGGIIGLVAGVMLAVLATGVAGFVFSWLRRRS-GSLIAPIALHWSLNGMGALAAALVWHLST |
4CAD Chain:C ((128-237)) | -----------------------------------------------------------------------------------------------------------------------------------PVLFLLLLAATFEELGWRGYAFDSLQSRYSLFKASILFGIFWSLWHFPLIFVNNSY-QY-EI-FN----QSIWYGLNFFLSILPMGIIITWMCLKNRKSIILAIIFHFLINLNQELL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42562 for 695 contacts (-61.2/contact) +
2D Compatibility (PS) -11250 + (NN) -1106 + (LL) 13796
1D Compatibility (HY) -10000 + (ID) 1050
Total energy: -52172.0 ( -75.07 by residue)
QMean score : 0.153
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