Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADVPLDAQERLELCDLLEELGP----AVATLIEGWTAHDLAAHIVLRERDLVAGLCIVLPGPFQRFAERRRARLAQSKDFTWLVARIRSGPPMGFFRIGWVRTLANLNEFFVHHEDVRRASGRGPRSLTPEMDAALWRNVRRGSHFLSRRLHGCGLEIEWVGTGKRVRVRSGEPTARLTGPPGELLLYVFGRRAVARVEVSGPLEAIAAVHRTHFGM |
3DI5 Chain:A ((11-56)) | ----QSWTYETESTQKMLDVLTDESLSQEIA-PGHWTLGRVAWHIVTAIPV----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7731 for 177 contacts (-43.7/contact) +
2D Compatibility (PS) -4798 + (NN) -4189 + (LL) 11916
1D Compatibility (HY) 0 + (ID) 450
Total energy: -5252.0 ( -29.67 by residue)
QMean score : 0.328
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