Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALTAEQKKEILRSYGLHETDTGSPEAQIALLTKRIADLTEHLKVHKHDHHSRRGLLLLVGRRRRLIKYISQIDVERYRSLIERLGLRR
1XMO Chain:O ((2-88))
-PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIR-
General information:
TITO was launched using:
RESULT:
Template:
1XMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20407 for 535 contacts (-38.1/contact) +
2D Compatibility (PS) -9664 + (NN) -6000 + (LL) 308
1D Compatibility (HY) -8800 + (ID) 2450
Total energy: -47013.0 ( -87.87 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_1XMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XMO-query.scw
PDB file :
Tito_Scwrl_1XMO.pdb
: