Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYVVTGGTGFIGRHVVSRLLDGRPEARLWALVRRQSLSRFERLAGQWGDRVRPLVGDLTELELSERTIAELGDIDHVLHCAAVHDTTWADATRAVIELAARLDATFHHVSSIAVAGDFAGHYTEADFDVGQRLPTPYHRMTFEAERLVRSTPGLRYRIYRPAVVVGDSRTGEMDTIDGPYYLFGVLAKLAVLPSFTPMLLPDIGRTNIVPVDYVADALVALMHADGRDGQTFHLTAPTAIGLRGIYRGIAGAAGLPPLLGTLPGFVAAPVLNARGRAKVLRNMAATQLGIPAEIFDVVGCAPTFTSDTTREALRGTGIHVPEFATYAPGLWRYWAEHLDPDRARRNDPLLGRHVIITGASSGIGRASAIAVAKRG-ATVFALARNGNALDELVTEIRAHGGQAHAFTCDVTDSASVEHTVKDILGRFDHVDYLVNNAGRSIRRSVVNSTDR-----LHDYERVMAVNYFGAVRMVLALLPHWRER---RFGHVVNVSSAGVQARNP-KYSSYLPTKAALDAFADVVASETLSDHITFTNIHMPLVATPMIVPSRRLNPVRAISAERAAAMVIRGLVEKPARIDTPLGTLAEAGNYVAPRLSRRILHQLYLGYPDSAAAQGISRPDADRPPAPRRPRRSARAGVPRPLRRLGRLVPGVHW |
| 4IQG Chain:C ((25-217)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVAKEREVLAMFETVDAQLGRLSALVNNAG------VVDQTTRVDGITLERLQRMFEINVFGSFLCAREAVKRMSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVNAVRPGIIETDI-------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106754 for 1516 contacts (-70.4/contact) +
2D Compatibility (PS) -20076 + (NN) -7822 + (LL) 29876
1D Compatibility (HY) -12400 + (ID) 3200
Total energy: -120376.0 ( -79.40 by residue)
QMean score : 0.548
|
|
|