Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKMMQGAAALIALVGAGESMALEWMSNSVGFRYGQQFTNPNNPDKFAKRIYSFTHADGYRYGSNFFNLDVFLSDNRDPRKGTDHGGSEVYAVYRHQLYASRVFDRPLGTGLVKDYAFTLGFDASRNNNLASAKKRALVFGPTLKFNGPGVLDLSLLYYREKNHFGVPGARHPDHTFDTTYMLNLTWMRPFKVGNHAAKFQGFVNYVGDKGEDYNDKHTAAETLVRTALMVAALPGDKRQPNLWLGVGYEYWHNKFGVDGGTGSRTSTPTLNMEFTF |
| 2W1N Chain:A ((10-237)) | --AEVTGSVSLEAL---EEVQVGENIEVGVGIDELV------NAEAF---AYDFTLN----YDENAFEYVEAISDDGVFVNAKKIEDGKVRVLVSSLTGEPLPAKEVLAKVVLRAEAKTEGSNLSVTNSSVGD-------GEGLVHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEG----LEGYILYKDGKKVAEIGKDETSYTF----------KKLNRHTIYNFKIAAKY-------SNGEVSSKESLTLRTA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18145 for 1672 contacts (-10.9/contact) +
2D Compatibility (PS) -23644 + (NN) -4548 + (LL) 4140
1D Compatibility (HY) 0 + (ID) 2200
Total energy: -44397.0 ( -26.55 by residue)
QMean score : 0.196
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