Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESRILSLAALTVLE---------LSPPDMVEAAARAGYSHVGLRLVPATVEEHHYPLLADAGLRRRTLARLRDSGVRTLDVEILR-LRP---DTRVGEFAAVLEVGAEFGARYVLVAGND--------------------DDERRSADNFAALCDLARPLGLDPHLEFMPWTGIRDLRQAARVVEAAARDNAGLLLDAFHFDRSASSLEDLRAIPPARLGYAQLCDVVGPRPTSM--DEIL---RQAREERRFPGDGGLDLLALLRALPE---NLPLSLEVPALDLLARGVDGAERARLAIERTRALLARL |
3CNY Chain:A ((7-300)) | EKDIKWGIAPIGWRNDDIPSIGKDNNLQQLLSDIVVAGFQGTEVGGFFP--------------GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGTGIQTKEETDRLMANTDPKLVGLLYDTGHIAVSDGDYMALLNAHIDRVVHVHFKDVRRSKEEECRAKGLTFQGSFLNGMFTVPGDGDLDFKPVYDKLIANNYKGWIVVEAEQDPSK---ANPLEMAQIAHRYIKQHLIEN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118038 for 2164 contacts (-54.5/contact) +
2D Compatibility (PS) -27149 + (NN) -4614 + (LL) 956
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -157045.0 ( -72.57 by residue)
QMean score : 0.464
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