Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSPPKIRRYIPADRDATLAIWLEAS---RVGHGFLGEAELQKQKALVRDHYLDASET--WLALDGDTPLGF----------IGLLDAFIGGLFVAPTAHGRGIGRQLV-----EHAATLKGALEVEVYAANREALGFYARCGFVESGRRPRDDEGRALEIVQLRREH
2FE7 Chain:A ((4-136))
-----EIRPAVPADAEQILAFIIELADYERARHEVVTDVE-----GIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGRNGIYLEDLYVTPEYR--GAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQDEWVRYRLDGEALRKMAE---
General information:
TITO was launched using:
RESULT:
Template:
2FE7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46040 for 640 contacts (-71.9/contact) +
2D Compatibility (PS) -12672 + (NN) -7117 + (LL) 772
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -76057.0 ( -118.84 by residue)
QMean score : 0.149
(partial model without unconserved sides chains):
PDB file :
Tito_2FE7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FE7-query.scw
PDB file :
Tito_Scwrl_2FE7.pdb
: