Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRGDKSKYSDKQQRKAEHIEESYKAKGVSESEAEARAWATVNKQSGGGERKGGSGRAKSETAKRADRKDSAHRAAQARSGRPANRGSASRGKRQGSTSVSEMTREELMQLARKRDIRGRSTMRKAELIEALSRA
2RNN Chain:A ((32-66))
-------------------------------------------------------------------------------------------------TLMELLKVSELKDICRSVSFPVS--GRKAVLQDLIRN-
General information:
TITO was launched using:
RESULT:
Template:
2RNN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12842 for 192 contacts (-66.9/contact) +
2D Compatibility (PS) -3983 + (NN) -2943 + (LL) 3984
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -17784.0 ( -92.62 by residue)
QMean score : 0.777
(partial model without unconserved sides chains):
PDB file :
Tito_2RNN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RNN-query.scw
PDB file :
Tito_Scwrl_2RNN.pdb
: