Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQMPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
2H46 Chain:E ((3-100))
------------------------------------------------------MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIE-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2H46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25130 for 507 contacts (-49.6/contact) +
2D Compatibility (PS) -10838 + (NN) -8511 + (LL) 5928
1D Compatibility (HY) -13600 + (ID) 4900
Total energy: -57051.0 ( -112.53 by residue)
QMean score : 0.262
(partial model without unconserved sides chains):
PDB file :
Tito_2H46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H46-query.scw
PDB file :
Tito_Scwrl_2H46.pdb
: