Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG
1MNH Chain:A ((1-153))
-GLSDGEWQLVLNVWGKVEADVAGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKVGNRVLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDMAAKYKELGFQG
General information:
TITO was launched using:
RESULT:
Template:
1MNH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64188 for 1129 contacts (-56.9/contact) +
2D Compatibility (PS) -16627 + (NN) -10666 + (LL) 208
1D Compatibility (HY) -18000 + (ID) 7050
Total energy: -116323.0 ( -103.03 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_1MNH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MNH-query.scw
PDB file :
Tito_Scwrl_1MNH.pdb
: