Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPSTIQTLTLFLTSGGVLLSLYVSASLSYLLYSDILLRFSSKITAPTMTLDCANASNVQAVNRSATKEMTFLLPEPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDCYLMITDGSASGISECRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNSYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESD-GDKGRGGIKGGFVHQRMASKIGRWYSRTMSKTERMGMELYVKYDGDPWTDSDALAPSGVMVSMKEPGW---YSFGFEIKDKKCDVPCIGIEMVHDG--GKKTWHSAATAIYCLMGSGQLLWDTVTGVDMAL |
| 4M3M Chain:A ((34-367)) | ---------------------------------------------------------------------------------------------------------------FVIREPFVSCSPIECRTFFLTQGSLLNDKHSNGTVKDRSPFRTLMSVKVGQSPNVYQARFEAVAWSATACHDGKKWMTVGVTGPDSKAVAVIHYGGVPTDVINSWAGDILRTQESSCTCIQGDCYWVMTDGPANRQAQYRIYKANQGRIIGQADISFNGGHIEECSC-YPNDGKVECVCRDNWTGTNRPVLVISPDL-SYRVGYLCAGIPSDTPRGEDAQFTGSCTSPMGNQGYGVKGFGF---RQGTDV--WMGRTISRTSRSGFEILRIKNGWTQTSKEQVRKQVVVDNLNWSGYSGSFTLPVELSGKDCLVPCFWVEMIRGKPEEKTIWTSSSSIVMC------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98958 for 2836 contacts (-34.9/contact) +
2D Compatibility (PS) -34489 + (NN) -8163 + (LL) 8808
1D Compatibility (HY) -23600 + (ID) 6300
Total energy: -162702.0 ( -57.37 by residue)
QMean score : 0.377
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