Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPSTIQTLTLFLTSGGVLLSLYVSASLSYLLYSDILLKFSPKITAPTMTLDCTNASNVQAVNRSATKEMTFLLPEPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDCYLMITDGSASGISKCRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNNYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESN-GDKGRGGIKGGFVHQRMASKIGRWYSRTMSKTERMGMELYVKYDGDPWTDSDALDPSGVMVSIKEPGW---YSFGFEIKDKKCDVPCIGIEMVHDG--GKKTWHSAATAIYCLMGSGQLLWDTVTGVDMAL |
| 4KS4 Chain:A ((33-366)) | ---------------------------------------------------------------------------------------------------------------FVIREPFVSCSPIECRTFFLTQGSLLNDKHSNGTVKDRSPFRTLMSVKVGQSPNVYQARFEAVAWSATACHDGKKWMTVGVTGPDSKAVAVIHYGGVPTDVINSWAGDILRTQESSCTCIQGDCYWVMTDGPANRQAQYRIYKANQGRIIGQADISFNGGHIEECSC-YPNDGKVECVCRDNWTGTNRPVLVISPDL-SYRVGYLCAGIPSDTPRGEDAQFTGSCTSPMGNQGYGVKGFGF---RQGTDV--WMGRTISRTSRSGFEILRIKNGWTQTSKEQVRKQVVVDNLNWSGYSGSFTLPVELSGKDCLVPCFWVEMIRGKPEEKTIWTSSSSIVMC------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103016 for 2823 contacts (-36.5/contact) +
2D Compatibility (PS) -34270 + (NN) -5308 + (LL) 8568
1D Compatibility (HY) -23600 + (ID) 6300
Total energy: -163926.0 ( -58.07 by residue)
QMean score : 0.386
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