Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP--RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE
1GII Chain:A ((4-287))-----FQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-----------VPSTAIREISLLKELN---HPNIVKLLDVIHT-----ENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF----------VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ-------


General information:
TITO was launched using:
RESULT:

Template: 1GII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -189125 for 2055 contacts (-92.0/contact) +
2D Compatibility (PS) -28120 + (NN) -16591 + (LL) 684
1D Compatibility (HY) -31200 + (ID) 6650
Total energy: -271002.0 ( -131.87 by residue)
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_1GII.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GII-query.scw
PDB file : Tito_Scwrl_1GII.pdb: