Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM
4ENY Chain:A ((11-263))
YQVGPLLGSG-FGSVYSGIRVSDNLPVAIKHVEKDRISDWG------RVPMEVVLLKKVSS---FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM
General information:
TITO was launched using:
RESULT:
Template:
4ENY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -191595 for 1992 contacts (-96.2/contact) +
2D Compatibility (PS) -26278 + (NN) -14483 + (LL) -592
1D Compatibility (HY) -30800 + (ID) 7750
Total energy: -271498.0 ( -136.29 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_4ENY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ENY-query.scw
PDB file :
Tito_Scwrl_4ENY.pdb
: