Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLERPPALAMPMPTEGTPPPLSGTPIPVPAYFRHAEPGFSLKRPRGLSRSLPPPPPAKGSIPISRLFPPRTPGWHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRS---KEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS-YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTA--GLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQPRAWGVLWCMAAEALSRGWALWQALLALLCWLWHGLAHPASWLQPLGPPATPPGSPPCSLLLDSSLSSNWDDDSLGPSLSPEAVLARTVGSTSTPRSRCTPRDALDLSDINSEPPRGSFPSFEPRNLLSLFEDTLDPT |
| 3A61 Chain:A ((15-266)) | ----------------------------------------------------------------------------------------------------RPECF-----ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK---------------AERNILEEV-KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG---------------GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP-PFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGA----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A61.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77529 for 1568 contacts (-49.4/contact) +
2D Compatibility (PS) -23074 + (NN) -17182 + (LL) 11160
1D Compatibility (HY) -16400 + (ID) 4050
Total energy: -127075.0 ( -81.04 by residue)
QMean score : 0.167
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