Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKP
3TH5 Chain:A ((29-163))
-QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTP
General information:
TITO was launched using:
RESULT:
Template:
3TH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65036 for 965 contacts (-67.4/contact) +
2D Compatibility (PS) -14815 + (NN) -10319 + (LL) 208
1D Compatibility (HY) -19600 + (ID) 5100
Total energy: -114662.0 ( -118.82 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_3TH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TH5-query.scw
PDB file :
Tito_Scwrl_3TH5.pdb
: