Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
4M21 Chain:B ((2-169))
MTEYKLVVVGACGVGKSALTIQLIQNHFV--------DSYRKQVVIDGETSLLDILDTA----YSAMRDQYMRTGEGFLLVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKSDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKE---------------------
General information:
TITO was launched using:
RESULT:
Template:
4M21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115818 for 1257 contacts (-92.1/contact) +
2D Compatibility (PS) -17155 + (NN) -5975 + (LL) 2116
1D Compatibility (HY) -20000 + (ID) 7300
Total energy: -164132.0 ( -130.57 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_4M21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M21-query.scw
PDB file :
Tito_Scwrl_4M21.pdb
: