Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITR---NESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIY----KDIHCDVF--FPLKFRDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL
3QLR Chain:A ((9-191))
--------IVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNT---RNAVIMGRKTWESIPQKFRPLPDRLNIILSRSYENEIID-DNIIH-ASSIESSLNLVS---------DVERVFIIGGAEIYNELINNSLVSHLLITEIEHPSPESIEMDTFLKFPLE--------SWTKQPKSELQKFVGDTVLEDDIKEGDFTYNYTLWTR--
General information:
TITO was launched using:
RESULT:
Template:
3QLR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122485 for 1230 contacts (-99.6/contact) +
2D Compatibility (PS) -18665 + (NN) -2193 + (LL) 1796
1D Compatibility (HY) -18000 + (ID) 3700
Total energy: -163247.0 ( -132.72 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3QLR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QLR-query.scw
PDB file :
Tito_Scwrl_3QLR.pdb
: