Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE
1J4I Chain:A ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
1J4I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57169 for 793 contacts (-72.1/contact) +
2D Compatibility (PS) -11911 + (NN) -6479 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 5200
Total energy: -94151.0 ( -118.73 by residue)
QMean score : 0.696
(partial model without unconserved sides chains):
PDB file :
Tito_1J4I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J4I-query.scw
PDB file :
Tito_Scwrl_1J4I.pdb
: