Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHENA--AWLDGQRLPPQGYAADE
1RC0 Chain:A ((3-200))
--VAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICWV--------------
General information:
TITO was launched using:
RESULT:
Template:
1RC0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148189 for 1591 contacts (-93.1/contact) +
2D Compatibility (PS) -21974 + (NN) -11855 + (LL) 352
1D Compatibility (HY) -18000 + (ID) 4150
Total energy: -203816.0 ( -128.11 by residue)
QMean score : 0.745
(partial model without unconserved sides chains):
PDB file :
Tito_1RC0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RC0-query.scw
PDB file :
Tito_Scwrl_1RC0.pdb
: