Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
4RHN Chain:A ((1-115))
-----------RPGGDTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG
General information:
TITO was launched using:
RESULT:
Template:
4RHN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81805 for 823 contacts (-99.4/contact) +
2D Compatibility (PS) -12630 + (NN) -10334 + (LL) 1392
1D Compatibility (HY) -15200 + (ID) 5500
Total energy: -124077.0 ( -150.76 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_4RHN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHN-query.scw
PDB file :
Tito_Scwrl_4RHN.pdb
: