Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAASGEQAPCSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVADAELEPLGEEAAGGDQFIHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYLPQKTASSSHPSA
4KXL Chain:D ((4-144))
----------SVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVAD--------EAAGGDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYL------------
General information:
TITO was launched using:
RESULT:
Template:
4KXL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97019 for 1016 contacts (-95.5/contact) +
2D Compatibility (PS) -14712 + (NN) -9282 + (LL) 1252
1D Compatibility (HY) -19600 + (ID) 6600
Total energy: -145961.0 ( -143.66 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_4KXL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KXL-query.scw
PDB file :
Tito_Scwrl_4KXL.pdb
: