Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSVREPQ
3FZW Chain:A ((1-127))
MNLPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVENPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVINVMRFDEHGRIQTMQAYWSEVNLSV----
General information:
TITO was launched using:
RESULT:
Template:
3FZW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79124 for 940 contacts (-84.2/contact) +
2D Compatibility (PS) -14227 + (NN) -6021 + (LL) 184
1D Compatibility (HY) -18800 + (ID) 6250
Total energy: -124238.0 ( -132.17 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_3FZW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FZW-query.scw
PDB file :
Tito_Scwrl_3FZW.pdb
: