Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVN-AVHGWVLGKIMCKITSALYTLNFVSGMQFLACISIDRYVAVT--------KVPSQSGVGKPCWIICFCVWMAAILLSIPQLVFYTV--NDNA-RCIPIFPR---YLGTSMKALIQMLEICI---GFVVPFLIMGVCYFITARTLM--KMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNPILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI |
| 4RWA Chain:A ((130-406)) | ------------------------------------------------SAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAK------LINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTK-------ICVFLFAFVVPILIITVCYGLMLL---GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFV------IVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219893 for 1834 contacts (-119.9/contact) +
2D Compatibility (PS) -25097 + (NN) -715 + (LL) 7564
1D Compatibility (HY) -25200 + (ID) 4050
Total energy: -267391.0 ( -145.80 by residue)
QMean score : 0.154
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