Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHIINSYENINNTARNNSDCPRVVLPEEIFFTISIVGVLENLIVLLAVFKNKNLQAPMYFFICSLAISDMLGSLYKILENILIILRNMGYLKPRGSFETTADDIIDSLFVLSLLGSIFSLSVIAADRYITIFHALRYHSIVTMRRTVVVLTVIWTFCTGTG---ITMVIFSHHVP------------------------TVITFTSLFPLMLVFILCLYVHMFLLARSHTRKISTLPRANM---------KGAITLTILLGVFIFCWAPF----VLHVLLMTFCPSNPYCACYMSLFQVNGMLIMCNAVIDPFIYAFRSPELRDAFKKMIFCSRYW |
| 2Y00 Chain:A ((26-299)) | --------------------------------------VAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLW---GSFLC---ELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISF--YIPLLIMIFVALRVYR--EAKEQ------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPD--------WLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221181 for 1558 contacts (-142.0/contact) +
2D Compatibility (PS) -22368 + (NN) -5946 + (LL) 4612
1D Compatibility (HY) -24400 + (ID) 3750
Total energy: -273033.0 ( -175.25 by residue)
QMean score : 0.220
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