Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASPALAAALAVAAAAGPNASGAGERGSGGVANASGASWGPPRGQYSAGAVAGLAAVVGFLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQ--------PDGAAYPQCGLNDETWYILSSCIGSFFAPCLIMGLVYARIYRVA---------------KLRTRTLSEKRAPVGPDG---ASPTT---ENGLGAAAGAGENGHCAPPPADVEPDESSAAAERRRRRGALRR------GGRRRAGAEGGAGGADGQGAGPGAAESGALTASRSPGPGGRLSRASSRSVEFFLSRRRRARSSVCRRKVAQA---REKRFTFVLAVVMGVFVLCWFPFFFSYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRRSFKHILFRRRRRGFRQ |
4U14 Chain:A ((8-443)) | ----------------------------------------------TIWQVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWAPAI--LFWQYFVGKRTVPPGECFIQ-FLSEPT-ITFGTAIAAFYMPVTIMTILYWRIYKETEKMNCFEMLRIDEGLRLKIYKDCEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNL--AKSRWYNQCPNRAKRVITTF-RTGTWDAYLIKEKKAAQTLSAILLAFIITWTPYNIMVLVNTFC-DSC-IPKTYWNLGYWLCYINSTVNPVCYALCNKTFRTTFKTLLL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187570 for 2866 contacts (-65.4/contact) +
2D Compatibility (PS) -39719 + (NN) 3973 + (LL) 2772
1D Compatibility (HY) -32800 + (ID) 5750
Total energy: -259094.0 ( -90.40 by residue)
QMean score : 0.186
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