Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQFPESVTENFEYDDLAEACYIGDIVVFGTVFLSIFYSVIFAIGLVGNLLVVFALTNSKKPKSVTDIYLLNLALSDLLFVATLPFWTHYLINEKG--LHNAMCKFTTAFFFIGFFGSIFFITVISIDRYLAIVLAANSMNNRTVQHGVTISLGVWAAAILVAAPQFMF--TKQKENECLGDYPEVLQEIWPVLR-----NVETNFLGFLLPLLIMSYCYFRIIQTL------FSC----------------------------------------------KNHKKAKAIKLILLVVIVFFLFWTPYNVMIFLETLKLYDF-FPS-CDMRKDLRLALSVTETVAFSHCCLNPLIYAFAGEKFRRYLYHLYGKCLAVLCGRSVHVDFSSSESQRSRHGSVLSSNFTYHTSDGDALLLL |
| 4XNW Chain:A ((52-382)) | --------------------------------YLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDE---YLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212106 for 2000 contacts (-106.1/contact) +
2D Compatibility (PS) -27578 + (NN) -8403 + (LL) 5332
1D Compatibility (HY) -32400 + (ID) 4200
Total energy: -279355.0 ( -139.68 by residue)
QMean score : 0.252
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